You can achieve this prerequisite by completing the Ubuntu 22.04 initial server setup guide.
You can learn more about Anaconda and conda by reading the official Anaconda Documentation. The Anaconda distribution ships with the conda command-line utility. Offering a collection of over 1,000 data science packages, Anaconda is available in both free and paid enterprise versions. It is commonly used for data science, machine learning, large-scale data processing, scientific computing, and predictive analytics.
To accomplish the same task with the new yaml environment file.Anaconda is an open-source package manager, environment manager, and distribution of the Python and R programming languages. That yaml file ( RELEASE-NAME.yml) can be deleted once the environment has been created.įor developers (or advanced users of conda) who are used to using: conda install -file within an existing environment, you should now use conda env update -file RELEASE-NAME.yml
Where you would have typed: conda create -n qiime2-RELEASE -file You would now type: wget # or your favorite toolĬonda env create -n qiime2-RELEASE -file RELEASE-NAME.yml Starting with 2017.12, we’ve updated our install instructions, which can be found here.Īs an additional upside to these changes, we can now use the latest conda (4.4) once more! This means that you shouldn’t see 404s while conda downloads QIIME 2’s dependencies if something changes. The net impact is we will no longer be using very specific builds/URLs. Instead of QIIME 2 using what we call an explicit environment file we’re switching to the more modern yaml environment file. We really appreciate your patience as we rebuilt our install files to fix these issues.Īs a direct result, we’ve retooled how we distribute these conda environments to prevent these issues from occurring in the future. The QIIME 2 development team would like to thank everyone for their help this last week identifying when our release instructions were broken, usually a dependency returning 404.
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